CDS

Accession Number TCMCG057C26718
gbkey CDS
Protein Id XP_018491618.1
Location join(30077574..30077594,30077682..30077851,30078031..30078190,30078272..30078568,30078663..30078887,30078986..30079153,30079293..30079455,30079567..30079754,30080073..30080336,30080454..30080542,30080642..30080789,30080878..30081096,30081187..30081510,30081593..30081737,30081868..30082076,30082196..30082398,30082537..30082735,30082823..30083091,30083170..30083310,30083425..30084178,30084252..30084848)
Gene LOC108862085
GeneID 108862085
Organism Raphanus sativus

Protein

Length 1650aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018636116.1
Definition PREDICTED: DNA-directed RNA polymerase I subunit 1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00182        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K02999        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005736        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006360        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTCAATCCACCACAGAGGGAGCTTCCCAAGTGGTGAAATCCGTTAGGTTTAGCTTCATGACAGAGGAAGATGTCGAAAAGCACAGTGTTATGCAAGTTGTAAACCCCGTCTTGCTCGATAACGTTTTGAGACCTGTCCCTGGTGGTCTCTATGATCCTCTTATGGGTCCAATGGAAGATAGATCAACTTGTAAGACGTGTGATCAGCTCGGTTTTGATTGCTCAGGACATTGTGGGCGTATAAAGCTTGTCTGTCCTATCTACCACCCTTTGCTGTTCACTCACCTTTTCAATCTTTTGCAAAGGACTTGTTTCTTCTGTCATCACTTTATGGTCAAAAAGGAAGTGGTTGCAAGATGCGTCTCTCAGTTGAAACTCATCATGAAAGGTGATGTAGTTTCCGCTAAGCAGCTGTCTCTTAAACCCAGTAATTCATCTGAAGAGCGCGAAGATTCTAAACTCACTGGTTCAGATGAAGAATGTGAAGAAGATTCTGACATGGGAAAACAGAGATGGACATCTCTTCAGTTTGCTGAAGTCTCTGACGTCTTGAATCAGTTTCTTAGGTTGAAATCAAGAAAGTGTGAATCTTGCAAAGCAAAGCCTCCTAAACTAGAGAAGCCTACCTTCGGATGGGTTCGCTTGGATGGTATGTCAGCGAGAGACATTGGAGCTAACGTAATGCGAGGGGTTAAGCTAAAGAAGTCCGCTAACAGTGGGGAAAGCTCTGACGAAGGTGAAGACAGTGGTATCAGTGGATTACAAGAAGTTGAAGATGGTGCTAAAAAGAAAAAAGGAAAATCTTCAAAAGCATCTAAAGACTATGGAGATCTCAAGAAAGCCTCTAAAAGAGACCTTTTGCCGATTGAGGCCAAGGAAATCTTAGAAGGTTTGTGGGATAATGAGTATGAGTTTTGCTCCTTCATTGGTGATCTTTGGCAGAGTGGATCTGAAAAAACGGACTGTTCTATGTTCTTTATGGAGAGTGTTCTTGTGCCGCCTACTAAATTTAGAGCTCCAACAAAAGGAGGTGATAGCGTTATGGAACATCCTCAAACCGTAGGGCTAAACAATGTCTTGCAAGCCAATATGGCCCTTGAGAATGCCTTCACTAACAAATTAGATCGATCCAAGACATCTTCCAGATGGATGAGTCTTCAAGAATCAGTCAATGTCCTGTTTGATAGCAAGACTGCCTCAGTTAAAAGCCAGAGAGAGGGTACTGGTATATGTCAATTGCTGGAGAAGAAAGAGGGTCTGTTTCGGCAAAAAATGATGGGAAAGAGAGTGAATCATGCATGCAGATCTGTGATATCTCCAGATCCTTTTATCGCTGTCAATGACATTGGAATTCCTCCTTGCTTTGCTTTGAAATTGAGCTATCCTGAGAGGGTGACTCCTTGGAATGTTGAAAAGTTGAGGCAGGCAATCATTAATGGTCCTGACATTCACCCGGGAGCAACATATTACTCTGACAACGTATCTACAATGAAGCTGCCTGCTAACAAAAAAGCACGAATAGCAATTGCAAGAAAGCTACTGTCCTCACGAGGAGTCACTACTGAACTTGGGAAAACTTGTGATGTCAACTTTGAAGGTAAAATTGTCTATCGACATATGCAAGATGGTGATGTCGTCCTTGTGAATCGTCAGCCAACATTACATAAACCTAGTCTTATGGCTCACATTGTCCGTGTTCTCAAGGGGGAAAAAACACTTCGTCTCCATTATGCAAATTGCAGTACATACAATGCAGATTTTGATGGGGATGAGATGAATGTGCATTTTCCACAAGATGAGATTTCACGAGCTGAGGCCTACAATATTGTTAATGCCAACAACCAATATGCCAGGCCTTCTAATGGTGATCCACTTCGAGCTTTAATTCAGGATCACATTGTTAGTTCGGTTTTACTTACTAAAGGGGACACCTTTTTGGACAAAGATGAATTCAATCAGCTTCTCTTCAGTTCCGGCGTGACTGACATGGTACTCGGTTCTTTTTCTGGACGATCTGGCAAGAAAGTCACACAATCAGCTTCTAATGCAGACCTGTTGATTGTCACGCCTGCCATTTTGAAACCAGTACCTCTTTGGACCGGAAAGCAGGTCATCACGGCAGTGTTAAATGAGATAACCAAAGGTCATCCCCCATTCAGCGTAGAGAAATCTACAAAACTTCCGGTTGACTTCTTCAATTCTAGATCAAGAGAAGCAAAATCTAAAAGTGGAGAATCCAACAAAAAGACCAAGAAGCATGATTTTAATGAAGATAAACTGCTCATCAGAAAAAATGAATTTGTCCGTGGCGTGATTGACAAGGCTCAGTTTGCGGACTATGGGTTGGTTCATACAGTGCATGAGCTCTATGGTCCAAATGCTGCAGGAAACCTGCTTTCTGTTTTTAGTCGTCTCTTCACAGTCTTCCTTCAGACTCAAGGTTTCACATGTGGAGTTGATGATCTTATTATTTTGAAAGATGTGGATGAAAAGAGGACAAACCAACTTCGAGAATGTGAAGGGGTTGGTGAAAAAGTACTCCGTAAGACCTTTGGCATTGATGTTAATGCTCAGATAGATCCTGAGGACATGAAATCCAGAATTGAGCGAGTTCTGTATGAGGATGGCGAACTTGCTTTGGCATCACTGGATAGGAGCGTCGTAAGTGAGCTCAACCAGTGTTCAGGCAAGGGGGTGATGAACGATTTGCTCTCTGATGGGTTGTTGAAAACACCTGGAACGAATTGTATCTCTCTGATGACAATATCTGGAGCTAAGGGTAGTAAGGTTAATTTCCAGCAAATTTCTTCTCACCTTGGCCAGCAAGATTTAGAAGGAAAAAGAGTTCCTCGAATGGTTTCGGGGAAGACATTACCTTGCTTCCACCCATGGGATTGGTCACCCAGAGCTGGAGGTTTTATTAGTGACAGATTCCTTAGCGGTCTTCGCCCCCAAGAATACTACTTTCATTGTATGGCTGGACGAGAAGGGTTAGTTGATACTGCAGTGAAGACATCACGTAGTGGGTATCTGCAGAGATGTTTGATGAAAAATCTTGAGAGCCTGAAAGTCAACTATGATTGTACAGTACGGGATGCTGATGGGTCCATCATTCAGTTCCAATATGGTGAAGATGGCGTGGATGTTCATCGGTCTAGCTTCATTGAAAAGTTCAAAGAAATGACAATAAATCAAGATATGTTCCTTCAAAGATGTAGCGAAGACATGCTGTCTGGATCGAGTAGTTACATAACAGATCTTCCTATTACTCTTAAGAAGGGAGCTGAGAAGTTTGTAGAGGCGATGCCTATGAAAGAACGTATTGCTTCTAAAATGGTGAGACAGGAAGATCTTCTGAAGCTGGTCAAGTCAAAATTCTTTGCAAGTCTCGCCCAGCCAGGGGAGCCTGTAGGTGTACTTGCTGCACAATCTGTAGGAGAGCCATCAACACAGATGACGTTGAATACTTTCCATCTTGCTGGACGTGGAGAGATGAATGTGACACTCGGAATCCCACGTTTACAAGAGATCTTGATGACTGCTGCTGCAGACATTAAGACACCCATCATGACTTGCCCGTTGCTGAAGGGTAAAACAAAGGATGATGCAAGTCAAATTACTGATAAGTTGAGGAAGATCACAGTAGCAGATATTATAAAGAGTATAGAAGTGTCCGTTATACCATTTGCAGTTCATGGGGGTGAGGTTTGCAGTATCCACAAGCTTAAGATAAATCTGTATAAGCCAGAGCATTATCCAAAGCACACAGATATTACTGAAGAAGACTGGGAAGAGACGATGACGGTTACGTTTTTGAGGAAGCTGGAAGACGCTATAGAGACTCACATGAAAATGCTCCTTAGAATCAGAGGCATAAAGGTTGAGAAAGACAGCGGTCCAAAATCAGGAAACGAAACGGATAACGATGATTCCGAGAGTGGAAAGAAGACCGGAGGCGATGATGATGATGATGATGATGAGGGAGAGGATAAAGAGGCTGATGATCTTGGTGCAGATGCGCAGAAAGAGAAGCAGGAAGCGACAGATGAGCAGGATTACGAGGAAAGTGACGACGATGAGAAGAATGAACCATCTTCGGTTAGTGGAGTAGTTGACCCTGAGACGGATGATGATGATGAGGATGAAAACGCAGAAGTTAGCAAGGAAGACAAGGAAGATGCTGTTGAAGCGAAGAAAGAAGTAAAGAAGAATGTTCAAGAAGGTAGTAAAAAGAAGAGACAGAGATTTGTCAGTGGTGAAAAAGACAGACATATCTTTGCTGAAGGCAAAGGAAAGACATTTGAGGTCCATTTCAAGTTTCATAAAAACGAGCCTCATATATTACTTGCTCAGGTTGCTCAGAAAACAGCGCAGAAAGTTTACATCCAGAACCTTGGAAAGATCGAACGGTGCACGGTGGCTAACTGTGGTGATCCTCAGGTGATATACTACGGAGACAATCCAAAGGAGAGAGCAGAGATCTCCAACGAAGAAAAGAAAGCCTCACCAGCTCTCCACGCGTCAGGAGTCGATTTCGCCGGTCTCTGGGAGTTTCAAGATAAGCTCGACGTCAGGTACTTGTACAGCAACAGCATTCACGACATGCTCAACACTTTTGGAGTGGAAGCAGCGAGAGAGACGATAATCAGGGAGATAAACCACGTTTTCAAATCTTACGGTATCTCCGTTAGCATCAGACACTTGAACCTCATCGCGGACTACATGACGTTCTCTGGTGGATACCGTCCGATGAGCCGTATGGGAGGAATCGCGGAATCAACTTCTCCTTTCTGCAGGATGACGTTTGAGACGGCAACTAAGTTCATTGTCCAAGCGGCTACTTATGGAGAAGTGGACAGGCTTGAAACTCCCTCGGCTAGAATATGTCTTGGCTTGCCCGCTCTCACGGGAACGGGTTGCTTCGACTTGTTGCAGAGAATGGATCTCTGA
Protein:  
MAQSTTEGASQVVKSVRFSFMTEEDVEKHSVMQVVNPVLLDNVLRPVPGGLYDPLMGPMEDRSTCKTCDQLGFDCSGHCGRIKLVCPIYHPLLFTHLFNLLQRTCFFCHHFMVKKEVVARCVSQLKLIMKGDVVSAKQLSLKPSNSSEEREDSKLTGSDEECEEDSDMGKQRWTSLQFAEVSDVLNQFLRLKSRKCESCKAKPPKLEKPTFGWVRLDGMSARDIGANVMRGVKLKKSANSGESSDEGEDSGISGLQEVEDGAKKKKGKSSKASKDYGDLKKASKRDLLPIEAKEILEGLWDNEYEFCSFIGDLWQSGSEKTDCSMFFMESVLVPPTKFRAPTKGGDSVMEHPQTVGLNNVLQANMALENAFTNKLDRSKTSSRWMSLQESVNVLFDSKTASVKSQREGTGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPFIAVNDIGIPPCFALKLSYPERVTPWNVEKLRQAIINGPDIHPGATYYSDNVSTMKLPANKKARIAIARKLLSSRGVTTELGKTCDVNFEGKIVYRHMQDGDVVLVNRQPTLHKPSLMAHIVRVLKGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHIVSSVLLTKGDTFLDKDEFNQLLFSSGVTDMVLGSFSGRSGKKVTQSASNADLLIVTPAILKPVPLWTGKQVITAVLNEITKGHPPFSVEKSTKLPVDFFNSRSREAKSKSGESNKKTKKHDFNEDKLLIRKNEFVRGVIDKAQFADYGLVHTVHELYGPNAAGNLLSVFSRLFTVFLQTQGFTCGVDDLIILKDVDEKRTNQLRECEGVGEKVLRKTFGIDVNAQIDPEDMKSRIERVLYEDGELALASLDRSVVSELNQCSGKGVMNDLLSDGLLKTPGTNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFKEMTINQDMFLQRCSEDMLSGSSSYITDLPITLKKGAEKFVEAMPMKERIASKMVRQEDLLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTKDDASQITDKLRKITVADIIKSIEVSVIPFAVHGGEVCSIHKLKINLYKPEHYPKHTDITEEDWEETMTVTFLRKLEDAIETHMKMLLRIRGIKVEKDSGPKSGNETDNDDSESGKKTGGDDDDDDDEGEDKEADDLGADAQKEKQEATDEQDYEESDDDEKNEPSSVSGVVDPETDDDDEDENAEVSKEDKEDAVEAKKEVKKNVQEGSKKKRQRFVSGEKDRHIFAEGKGKTFEVHFKFHKNEPHILLAQVAQKTAQKVYIQNLGKIERCTVANCGDPQVIYYGDNPKERAEISNEEKKASPALHASGVDFAGLWEFQDKLDVRYLYSNSIHDMLNTFGVEAARETIIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEVDRLETPSARICLGLPALTGTGCFDLLQRMDL